Abstract
There is a trend to consider the gene pool of the Basques as a âliving fossilâ of the earliest modern humans that colonized Europe. To investigate this assumption, we have typed 45 binary markers and five short tandem repeat loci of the Y chromosome in a set of 168 male Basques. Results on these combined haplotypes were analyzed in the context of matching data belonging to approximately 3000 individuals from over 20 European, Near East and North African populations, which were compiled from the literature. Our results place the low Y-chromosome diversity of Basques within the European diversity landscape. This low diversity seems to be the result of a lower effective population size maintained through generations. At least some lineages of Y chromosome in modern Basques originated and have been evolving since pre-Neolithic times. However, the strong genetic drift experienced by the Basques does not allow us to consider Basques either the only or the best representatives of the ancestral European gene pool. Contrary to previous suggestions, we do not observe any particular link between Basques and Celtic populations beyond that provided by the Paleolithic ancestry common to European populations, nor we find evidence supporting Basques as the focus of major population expansions.
Similar content being viewed by others
Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
References
Barbujani G : Genes, people and languages. Am J Hum Genet 2000; 67: 264â266.
Etcheverry MA : El factor rhesus: su genética e importancia clÃnica. El DÃa Médico 1945; 17: 1237â1259.
Mourant AE : The blood groups of the Basques. Nature 1947; 160: 505.
Bertranpetit J, Cavalli-Sforza LL : A genetic reconstruction of the history of the population of the Iberian Peninsula. Ann Hum Genet 1991; 5: 51â67.
Gorrochategui J : Planteamiento de la linguÃstica histórica en la datación del euskara; in XV Congreso de Estudios Vascos Donostia/San Sebastian: Eusko Ikaskuntza/Sociedad de Estudios Vascos, 2002, pp 103â114.
Wilson JF, Weiss DA, Richards M, Thomas M, Bradman N, Goldstein DB : Genetic evidence for different male and female roles during cultural transitions in the British Isles. Proc Natl Acad Sci USA 2001; 98: 5078â5083.
Chikhi L, Nichols RA, Barbujani G, Beaumont MA : Y genetic data support the Neolithic demic diffusion model. Proc Natl Acad Sci USA 2002; 99: 11008â11013.
González AM, Brehm A, Pérez JA, Maca-Meyer N, Flores C, Cabrera VM : Mitochondrial DNA Affinities at the Atlantic Fringe of Europe. Am J Phys Anthropol 2003; 120: 391â404.
Flores C, Maca-Meyer N, González AM et al: Reduced genetic structure of the Iberian Peninsula revealed by Y-chromosome analysis: implications for population demography. Eur J Hum Genet 2003; 12: 855â863.
Underhill PA, Shen P, Lin AA et al: Y chromosome sequence variation and the history of human populations. Nat Genet 2000; 26: 358â361.
Bosch E, Calafell F, Comas D, Oefner PJ, Underhill PA, Bertranpetit J : High-resolution analysis of human Y-chromosome variation shows a sharp discontinuity and limited gene flow between Northwestern Africa and the Iberian Peninsula. Am J Hum Genet 2001; 68: 1019â1029.
Brión M, Salas A, González-Neira A, Lareu MV, Carracedo A : Insights into Iberian population origins through the construction of highly informative Y-chromosome haplotypes using biallelic markers, STRs, and the MSY1 minisatellite. Am J Phys Anthropol 2003; 122: 147â161.
Jobling MA, Tyler-Smith C : The human Y chromosome: an evolutionary marker comes of age. Nat Rev Genet 2003; 4: 598â612.
Flores C, Maca-Meyer N, Pérez JA, González AM, Larruga JM, Cabrera V : A predominant European ancestry of paternal lineages from Canary islanders. Ann Hum Genet 2003; 67: 138â152.
Semino O, Passarino G, Oefner PJ et al: The genetic legacy of Paleolithic Homo sapiens sapiens in extant Europeans: a Y chromosome perspective. Science 2000; 290: 1155â1159.
Cinnioâlu C, King R, Kivisild T et al: Excavating Y-chromosome haplotype strata in Anatolia. Hum Genet 2004; 114: 127â148.
Y Chromosome Consortium: a nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Res 2002; 12: 339â348.
GarcÃa O, MartÃn P, Gusmao L et al: A Basque Country autochthonous population study of 11 Y-chromosome STR loci. Forensic Sci Int 2004; 145: 65â68.
Schneider S, Roessli D, Excoffier L : Arlequin Ver. 2.000: a software for population genetics data analysis. Switzerland: Genetics and Biometry Laboratory, University of Geneva, 2000.
Reynolds JB, Weir S, Cockerham CC : Estimation for the coancestry coefficient: basis for a short-term genetic distance. Genetics 1983; 105: 767â779.
Wilson IJ, Weale ME, Balding DJ : Inferences from DNA data: population histories, evolutionary processes and forensic match probabilities. J Roy Statist Soc A 2003; 166: 155â201.
Kayser M, Roewer L, Hedman M et al: Characteristics and frequency of germline mutations at STR loci from the human Y chromosome, as revealed by direct observation in father/son pairs. Am J Hum Genet 2000; 66: 1580â1588.
Zhivotovsky LA, Underhill PA, Cinnioglu C et al: The effective mutation rate at Y chromosome short tandem repeats, with application to human population-divergence time. Am J Hum Genet 2004; 74: 50â61.
Hurles ME, Veitia R, Arroyo E et al: Recent male-mediated gene flow over a linguistic barrier in Iberia, suggested by analysis of a Y-Chromosomal DNA polymorphism. Am J Hum Genet 1999; 65: 1437â1448.
Rosser HZ, Zerjal T, Hurles ME et al: Y-Chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language. Am J Hum Genet 2000; 67: 1526â1543.
Maca-Meyer N, Sánchez-Velasco P, Flores C et al: Y chromosome and mitochondrial DNA characterization of Pasiegos, a human isolate from Cantabria (Spain). Ann Hum Genet 2003; 67: 329â339.
Aguirre AI, Vicario A, Mazón LI et al: Are the Basques a single and a unique population? Am J Hum Genet 1991; 49: 450â458.
Iriondo M, Barbero MC, Manzano C : DNA polymorphisms detect ancient barriers to gene flow in Basques. Am J Phys Anthropol 2003; 122: 73â84.
Cavalli-Sforza L, Feldman MW : Spatial subdivision of populations and estimates of genetic variation. Theor Popul Biol 1990; 37: 3â25.
Alonso S, Armour JAL : MS205 minisatellite diversity in Basques: evidence for a pre-Neolithic component. Genome Res 1998; 8: 1289â1298.
Hill EW, Jobling M, Bradley DG : Y-chromosome variation and Irish origins. Nature 2000; 404: 351â352.
De la Rúa C : Los estudios de paleoantropologÃa en el PaÃs Vasco. Munibe 1990; 42: 199â219.
Izagirre N, de la Rúa C : An mtDNA analysis in ancient Basque populations: implications for haplogroup V as a marker for a major Paleolithic expansion from southwestern Europe. Am J Hum Genet 1999; 65: 199â207.
Torroni A, Bandelt HJ, D'Urbano L et al: mtDNA analysis reveals a major late Paleolithic population expansion from southwestern to northeastern Europe. Am J Hum Genet 1998; 62: 1137â1152.
Achilli A, Rengo C, Magri C et al: The molecular dissection of mitochondrial DNA haplogroup H confirms that the franco-cantabrian glacial refuge was a major source for the European gene pool. Am J Hum Genet 2004; 75: 910â918.
Bandelt HJ, Forster P, Röhl A : Median-joining networks for inferring intraespecific phylogenies. Mol Biol Evol 1999; 16: 37â48.
Acknowledgements
CF is a FUNCIS Postdoctoral Fellow. SA is a Ramón y Cajal Fellow. This work has been partly funded by Ministerio de Educación y Ciencia and by the UPV/EHU project 9/UPV 00154.310-14495/2002 (to CR) and by grants BMC2001-3511 from Ministerio de Ciencia y TecnologÃa and COF2002-015 from Gobierno de Canarias to VMC.
Author information
Authors and Affiliations
Corresponding author
Additional information
Supplementary Information accompanies the paper on European Journal of Human Genetics website (http://www.nature.com/ejhg)
Rights and permissions
About this article
Cite this article
Alonso, S., Flores, C., Cabrera, V. et al. The place of the Basques in the European Y-chromosome diversity landscape. Eur J Hum Genet 13, 1293â1302 (2005). https://doi.org/10.1038/sj.ejhg.5201482
Received:
Revised:
Accepted:
Published:
Issue date:
DOI: https://doi.org/10.1038/sj.ejhg.5201482
Keywords
This article is cited by
-
The Y chromosome of autochthonous Basque populations and the Bronze Age replacement
Scientific Reports (2021)
-
New insights on intercontinental origins of paternal lineages in Northeast Brazil
BMC Evolutionary Biology (2020)
-
Whole Y-chromosome sequences reveal an extremely recent origin of the most common North African paternal lineage E-M183 (M81)
Scientific Reports (2017)
-
Detection of phylogenetically informative polymorphisms in the entire euchromatic portion of human Y chromosome from a Sardinian sample
BMC Research Notes (2015)
-
Human maternal heritage in Andalusia (Spain): its composition reveals high internal complexity and distinctive influences of mtDNA haplogroups U6 and L in the western and eastern side of region
BMC Genetics (2014)